Welcome to CAPYBARA

• RNA-driven analysis now consistently uses the selected RNA sample across major result paths.
• Results now support historical kNN run selection with timestamped runs (latest selected by default).
• Final Classification appears before Concordance, with improved differential coverage context and kNN emphasis.
• QC comments and Mitelman-tagged fusions are shown in Final Classification.
• Directory updates include My/Shared context switching, create-case from owned patients, and metadata columns (age/sex/created info).
• Results modal layout has been refined for more consistent scrolling and readability.
• RNA status messaging now consistently shows Waiting for RNA data, Processing, Uploaded, and QC Failure states.

• Archive tab removed and pilot samples moved back to Files.
• QC failed cases now show a black X badge on case cards.
• New navigation arrows on Results page for case-to-case movement.
• Edit Case now opens Tissue Upload directly in edit mode.
• Alert for patient files created without any case.

Email notifications now alert users when their cases become ready to resolve.

OTTER v2 classifier released and samples re-classified against the new atlas.